rs6549077 chr3:86147191 C>T
- Sequence
cctaaacccaaagtagagtcttac[C/T]tgctccagctccccagagagctga
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.34 | -0.61 | 1.20 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, eye color, fasting blood glucose, ldl cholesterol, suicide attempts in bipolar disorder, suicide attempts in bipolar disorder (substance abuse/dependence), triglycerides change with statins