rs6554130 chr4:53812296 G>A
- Sequence
gttggtgctacatggttcaaaaat[G/A]atgtcatattataatagctgtagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.54 | -2.58 | 1.00 | -7.07 | Concordant |
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Motif analysis
