rs6555911 chr5:170693928 A>G

Sequence
tcatgggtgtggcctttggacagc[A/G]ccttagcaggaatgtggtggagag
ASB for transcription factors
REST_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN -1.15 1.77 1.004.0·10-3 2.33 0.72 Weak Concordant
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Motif analysis

REST_HUMAN Weak Concordant
REST_HUMAN pic

Genetic associations

GRASP ldl cholesterol total cholesterol years of education
GTEx eQTL Heart_Left_Ventricle

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