rs6556885 chr5:95825737 G>A

Sequence
tacacacccactccttgagaggtc[G/A]tagctccacacatgactccagctg
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
ASB for transcription factors
GATA1_HUMAN MNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN -0.49 3.81 0.972.2·10-6 1.88 n/a No Hit
MNT_HUMAN 1.91 -0.65 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP homa-ir
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Muscularis Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Whole_Blood

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