rs6556899 chr5:96068327 T>C
- Sequence
tgaatgaacagtgtctgtcttggg[T/C]cttgtctaggaaaacggaataaga
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- SPT5H_HUMAN NCOR1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | -1.09 | 1.84 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -1.83 | 2.41 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 0.18 | 0.99 | 2.00 | n/a | No Hit |
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