rs6559162 chr8:6434952 A>G

Sequence
ggctgggctaaagacgggaagtca[A/G]tgggcagttccaagaacagaaagt
ASB in cell types
LNCaP C4-2 (prostate carcinoma)
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.31 -2.06 7.4·10-41.00 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  fasting blood glucose,  stabilized warfarin dose,  tetrology of fallot
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Testis,  Whole_Blood

Download