rs6560217 chr9:71630352 C>T
- Sequence
tctgctttatatattggatgtttc[C/T]aatctaatcaaacagaaatacatg
- ASB in cell types
- iPSC (induced pluripotent stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | -1.82 | 2.10 | 1.17 | 4.92 | Concordant |
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Motif analysis
Genetic associations
GRASP asthma, eye color, fasting blood glucose, hip bone mineral density (bmd), rheumatoid arthritis