rs6560690 chr10:132320379 T>C
- Sequence
cttgaatctgcacggcggtgactg[T/C]gggttttaaagggacagtgagggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) breast tumor macrophages
- ASB for transcription factors
- ESR1_HUMAN JUN_HUMAN CEBPB_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.18 | 2.97 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | -0.36 | 1.32 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | n/a | 2.27 | 2.50 | n/a | No Hit |
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