rs6561556 chr13:49691611 C>T
- Sequence
gggtcggggccagagcgaggattc[C/T]gtgcccgcctcgcaccctggccag
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- RBM25_HUMAN TYY1_HUMAN LMBL2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 2.37 | n/a | 3.00 | n/a | n/a | |||
| TYY1_HUMAN | 2.14 | 0.87 | 2.00 | n/a | No Hit | |||
| LMBL2_HUMAN | 1.61 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood