rs6564087 chr16:84972827 T>C

Sequence
ggccaggagagtgtgggctctcca[T/C]ggctgctctgggagccagaagatg
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.91 0.66 1.2·10-41.00 2.86
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  hdl cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Coronary,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Thyroid,  Whole_Blood

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