rs6564099 chr16:85047566 T>C
- Sequence
ttcctccagctggaaaggaaggtt[T/C]cctcagagcttcagacacctgcag
- ASB in cell types
- K562 (myelogenous leukemia) adult erythroblasts
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 1.03 | 0.48 | 2.82 | |||
| adult erythroblasts | n/a | 1.87 | 2.50 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood