rs6565573 chr17:81488104 A>G
- Sequence
actcggccctccccggcggcctcc[A/G]ggcgggacgcggcgtcggcgcctg
- ASB in cell types
- HepG2 (hepatoblastoma) U87 (glioblastoma) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- RBM25_HUMAN CDK8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | -0.41 | 2.24 | 2.00 | n/a | n/a | |||
| CDK8_HUMAN | 1.63 | -1.31 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid