rs6566072 chr18:75267685 G>A
- Sequence
gggtataagaaatgcttctgaaaa[G/A]aggaagagagacctttcgtatgca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocyte-derived dendritic cells TALL1 (T-Acute Lymphoblastic Leukemia)
- ASB for transcription factors
- SPI1_HUMAN IKZF2_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.98 | -0.30 | 1.62 | -2.76 | Concordant | |||
| IKZF2_HUMAN | 2.49 | -2.10 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.27 | n/a | 1.00 | -0.90 | Weak Concordant |
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Motif analysis
