rs6569074 chr6:119350693 T>C
- Sequence
attttccaaaatgtgttgtaattc[T/C]cctgttgctccacaaataaggggt
- ASB in cell types
- activated primary CD4+ T cells from blood SK-N-SH (neuroblastoma) gastroesophageal sphincter GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- CTCF_HUMAN NFAC2_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.67 | 1.29 | 1.24 | n/a | No Hit | |||
| NFAC2_HUMAN | 2.48 | -1.70 | 2.00 | n/a | No Hit | |||
| AHR_HUMAN | -1.14 | 1.69 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3