rs6570307 chr6:139124727 A>C

Sequence
aagatcaaatttttgtctttaagt[A/C]ctatgatttttttttccctttaaa
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.81 0.08 0.021.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  diabetic retinopathy in type 2 diabetes mellitus,  salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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