rs6571775 chr14:37060712 C>G

Sequence
gcccatctttgcaacctcggaaga[C/G]aggctccaagttctccaacactta
ASB in cell types
22RV1 (prostate carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.16 -0.58 0.051.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP college completion,  height,  rheumatoid arthritis,  years of education
GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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