ADASTRA v5.1.3
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rs6571826
chr14:21437544
T
>
A
Sequence
gagattaaattccctaccatctac[T/A]ctgaattcttcaccctgaagagta
ASB in cell types
primary B-CLL cells
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RBM25_HUMAN
TYY1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN
2.77
0.72
3.3·10
-6
0.59
2.00
n/a
n/a
TYY1_HUMAN
2.66
-1.87
0.01
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
homa-b
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Nucleus_accumbens_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Lung
,
Nerve_Tibial
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)