rs6572146 chr14:42299873 T>C
- Sequence
tgccattggatcactggagtgtga[T/C]tgaaagaaaagtaaaaaccagagt
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) OCI-LY7 (diffuse large B-cell lymphoma) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN FOXP1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.38 | 3.32 | 1.25 | n/a | No Hit | |||
| STAG1_HUMAN | -2.56 | 2.48 | 1.00 | n/a | n/a | |||
| FOXP1_HUMAN | -3.77 | 2.21 | 1.50 | n/a | No Hit |
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