rs6572563 chr14:49304315 A>C
- Sequence
gctgtcgctgagaacaagtgccaa[A/C]aaatcagcaggcagtcccctcggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.79 | 1.52 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, hdl cholesterol, obesity with early age of onset (age >2), triglycerides