rs6573312 chr14:60485818 G>T
- Sequence
agcctcgggccgcaccaacccagg[G/T]gataaggcgactccggtcgctctg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- BRD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD2_HUMAN | 2.21 | -1.68 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP height, infant head circumference, obesity with early age of onset (age >2), parkinsons disease
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Thyroid