ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6573380
chr14:61344262
A
>
G
Sequence
gaaaataaatgtaaaatgcctggc[A/G]ccactgaggaagtagggtgaggag
ASB in cell types
MDM(monocyte derived macrophages)
macrophages form periferal blood
monocyte-derived macrophages from peripheral blood
ASB for transcription factors
SPI1_HUMAN
KAISO_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
0.24
2.70
1.00
3.7·10
-8
1.96
n/a
No Hit
KAISO_HUMAN
-3.67
3.35
1.00
8.6·10
-5
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
ldl cholesterol
,
refractive error
,
systolic blood pressure (sbp)
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Skin_Not_Sun_Exposed_Suprapubic
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)