ADASTRA v5.1.3
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rs6574039
chr14:72024298
T
>
C
Sequence
cgtctaacagtacatcacaatttc[T/C]tgttcctaacgttgaatgtgcaca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
neural cell
GM19193 (female B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.76
0.35
3.2·10
-3
1.00
1.25
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
amyotrophic lateral sclerosis (als) outcome
,
diastolic blood pressure (dbp)
,
fasting insulin
,
homa-ir
,
systolic blood pressure (sbp)
,
total cholesterol
,
years of education
GTEx eQTL
Esophagus_Muscularis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)