rs6574341 chr14:76956460 C>T
- Sequence
ggagggccaccccctcctcttgct[C/T]ccctcccctccccgggtccagccc
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) Ishikawa (endometrial adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.88 | 0.37 | 1.14 | |||
| A549 (lung carcinoma) | -0.10 | 1.23 | 2.00 | |||
| Ishikawa (endometrial adenocarcinoma) | -0.11 | 1.05 | 1.41 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Prostate, Thyroid, Uterus, Vagina