rs6575157 chr14:90828377 T>C
- Sequence
ggacctaaaaccgcggttcgattt[T/C]ccttatttcctcccagcgcttatt
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) Th1-cells
- ASB for transcription factors
- SPT5H_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 1.84 | -1.33 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | -0.57 | 1.64 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Cells_Cultured_fibroblasts, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg