rs6575246 chr14:92329020 G>A
- Sequence
gagagtttcaggggtgtgacagac[G/A]ctgccatctgatggctgcctccct
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma) GM19240 (B cells Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.00 | 2.36 | 1.39 | -0.19 | Weak Discordant | |||
| STAG1_HUMAN | -0.45 | 2.61 | 1.40 | n/a | n/a |
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Motif analysis
