ADASTRA v5.1.3
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rs6575334
chr14:93431261
C
>
T
Sequence
tgtccccggtgctgaaaaataata[C/T]ggtcttcctcgggctccagcgggg
ASB in cell types
Jurkat (T-cells)
MCF7 (Invasive ductal breast carcinoma)
Ishikawa (endometrial adenocarcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Jurkat (T-cells)
-2.56
2.90
1.00
1.5·10
-6
1.00
MCF7 (Invasive ductal breast carcinoma)
0.43
1.89
1.00
0.02
1.50
Ishikawa (endometrial adenocarcinoma)
0.01
1.44
1.00
0.03
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
fasting insulin
,
hdl cholesterol change with statins
,
homa-b
,
homa-ir
,
serum creatinine
,
total cholesterol
GTEx eQTL
Brain_Cerebellum
,
Brain_Cortex
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale