rs6578048 chr8:139858731 C>T
- Sequence
ccggcacctgcaggaacttaactg[C/T]tcaatgataatgctctgtgccttc
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | -1.74 | 2.53 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP late onset alzheimers disease, partial epilepsy, variant creutzfeldt-jakob disease, waist hip ratio