rs6578370 chr11:3476424 G>A
- Sequence
aataagctaacaggccatttactc[G/A]ggctgagattgtttgtgtaatttt
- ASB in cell types
- RWPE2 GM18486 (Lymphoblastoid Cell Lines) esophagus squamous epithelium glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.85 | 0.06 | 1.74 | n/a | No Hit | |||
| STAG1_HUMAN | 2.53 | -0.01 | 2.93 | n/a | n/a |
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