rs6578875 chr11:7571805 T>C
- Sequence
ctcctgggccgggctcaggtggca[T/C]cagtggtggttctttgtccctgtg
- ASB in cell types
- THP-1 (acute monocytic leukemia) keratinocytes GM02630 (Fanconi anemi) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SNAI2_HUMAN RAD21_HUMAN MEF2B_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 3.01 | -5.08 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | 0.97 | 0.58 | 1.20 | n/a | n/a | |||
| MEF2B_HUMAN | -1.75 | 2.08 | 1.00 | n/a | No Hit |
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