rs6580323 chr5:139961194 C>T
- Sequence
gggtttcgggagggttgattgggt[C/T]tgtggtctgaggagaagggggagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN PKNX1_HUMAN IRF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -2.14 | 2.33 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -1.59 | 2.26 | 1.25 | n/a | No Hit | |||
| PKNX1_HUMAN | -2.92 | 2.81 | 1.00 | n/a | No Hit | |||
| IRF5_HUMAN | -2.22 | 2.19 | 1.00 | n/a | n/a |
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