rs6581560 chr12:64404338 C>G
- Sequence
gccgcccggaagcgccggccgctc[C/G]ctgcatgctgggagttgtaggcct
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- ELF1_HUMAN CTCF_HUMAN ESR1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -1.03 | 1.72 | 1.83 | n/a | No Hit | |||
| CTCF_HUMAN | 0.60 | 1.51 | 1.38 | -3.79 | Discordant | |||
| ESR1_HUMAN | 1.25 | 2.24 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | n/a | 2.08 | 2.00 | n/a | n/a | |||
| CDK8_HUMAN | -0.38 | 1.20 | 2.00 | n/a | n/a |
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Motif analysis
