rs6584307 chr10:99667293 A>G
- Sequence
cctccatgagtcatttaagaggca[A/G]acatttattgagggtttgctgtgt
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.39 | -0.69 | 1.44 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.74 | 0.11 | 1.38 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP height, ldl cholesterol, premature ovarian failure, rheumatoid arthritis, systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Brain_Cerebellum, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid