rs6584463 chr10:101939322 G>A

Sequence
ccaacagctcacacctgtgcatgg[G/A]tggtgcctcctcaagaccctgacc
ASB in cell types
MOLM14 (Adult acute myeloid leukemia) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN CDK8_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.07 n/a 0.021.00 2.50 n/a n/a
CDK8_HUMAN 1.90 -0.90 0.031.00 2.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  body mass index (bmi),  fasting blood glucose,  homa-ir,  ldl cholesterol,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Thyroid,  Whole_Blood

Download