rs6584588 chr10:104139413 C>T
- Sequence
aatctcacgcacacatgtgcatac[C/T]gccccctatccccacctagacaca
- ASB in cell types
- epithelial cell of prostate LNCaP (prostate carcinoma) GM18951 (B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 1.39 | 1.34 | n/a | No Hit | |||
| STAG1_HUMAN | -0.70 | 1.26 | 1.04 | n/a | n/a |
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