rs6584949 chr10:109575106 G>A
- Sequence
ctaatggtcattttgtgctctcct[G/A]tttgtcattcttgtatgtatttgc
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.47 | -0.07 | 1.48 | -1.61 | Weak Concordant | |||
| FOXA1_HUMAN | 1.08 | -0.49 | 1.50 | n/a | No Hit |
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Motif analysis
