rs6586154 chr10:88901378 T>C

Sequence
ctactttataaccttgcatagagt[T/C]ctaagtaaggtatcccgcagcaga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.64 0.96 0.851.8·10-3 1.10
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) comorbid depressive syndrome and alcohol dependence
GTEx eQTL Cells_Cultured_fibroblasts Colon_Transverse Heart_Atrial_Appendage Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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