rs6587092 chr17:20848934 A>G
- Sequence
tggcttgcagaaaaaaaagtgtca[A/G]aaaatttatcattggagaaaagtc
- ASB in cell types
- 22RV1 (prostate carcinoma) prostate gland
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.37 | 0.39 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen