rs6587093 chr17:20849078 A>G
- Sequence
ctctctctcaccctatggggaaag[A/G]ggctatgtgaaaggaaaatgaatt
- ASB in cell types
- LNCaP (prostate carcinoma) GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 4.00 | -3.47 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 2.65 | -0.94 | 1.22 | n/a | n/a |
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