rs6587135 chr17:21300255 A>G
- Sequence
gagtggggtcgggaaaagagggac[A/G]gggcacctctttctcagagctgta
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) TTC-1240 (Rhabdoid tumor of the kidney) HT1080 (fibrosarcoma) NALM-6 (adult B acute lymphoblastic leukemia)
- ASB for transcription factors
- FOS_HUMAN SSRP1_HUMAN SMRC1_HUMAN NFIB_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 2.55 | n/a | 2.00 | n/a | n/a | |||
| SSRP1_HUMAN | n/a | 3.23 | 2.00 | n/a | n/a | |||
| SMRC1_HUMAN | 2.17 | -0.56 | 2.00 | n/a | n/a | |||
| NFIB_HUMAN | 2.04 | -1.22 | 1.00 | n/a | n/a | |||
| SSXT_HUMAN | 2.41 | -4.87 | 2.00 | n/a | n/a |
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