rs6588277 chr1:67555890 G>C
- Sequence
agtgtgagcaattaggtaaattgt[G/C]cctaatttactactccctaaggaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.34 | 2.32 | 1.25 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.21 | 2.19 | 1.00 | n/a | n/a | |||
| NFAC3_HUMAN | -2.45 | 2.39 | 1.00 | n/a | No Hit |
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