rs6588496 chr1:53899136 G>A
- Sequence
gacacacacagaacaaaacatcga[G/A]taactggcatggtgtggcagaagg
- ASB in cell types
- 22RV1 (prostate carcinoma) K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.35 | -0.26 | 1.52 | n/a | No Hit | |||
| GCR_HUMAN | 2.33 | -2.17 | 1.00 | n/a | No Hit |
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