rs6588497 chr1:53899154 C>T
- Sequence
catcgagtaactggcatggtgtgg[C/T]agaaggcaagttctggatgattta
- ASB in cell types
- LNCaP (prostate carcinoma) K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.80 | -0.15 | 1.45 | n/a | No Hit | |||
| GCR_HUMAN | 2.04 | -2.07 | 1.00 | n/a | No Hit |
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