rs6589706 chr11:118877104 A>G
- Sequence
attactgtctgaagcttggtttcc[A/G]catctgcagtgtggtaataaaaat
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) germinal center B-cells
- ASB for transcription factors
- FLI1_HUMAN SMCA4_HUMAN SPI1_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FLI1_HUMAN | -1.14 | 1.61 | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 0.31 | 1.47 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.14 | 0.81 | 1.36 | n/a | No Hit | |||
| ELF1_HUMAN | -1.30 | 1.30 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood