rs6591335 chr11:68209345 T>C
- Sequence
atgtccagggaacactagagggcg[T/C]atgagagcttctactttcaggaaa
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) neutrophils from periferal blood erythroid cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.64 | 0.98 | 1.38 | 2.83 | Concordant |
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Motif analysis
