ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6645
chr12:14774891
C
>
G
Sequence
cgccgccctcagggagctggctcc[C/G]ccagcaaaggcccttttcatggtc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
22RV1 (prostate carcinoma)
ASB for transcription factors
IKZF2_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
-1.44
2.00
1.00
6.8·10
-3
1.00
n/a
n/a
ANDR_HUMAN
2.31
-1.25
7.1·10
-3
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)