rs6645 chr12:14774891 C>G

Sequence
cgccgccctcagggagctggctcc[C/G]ccagcaaaggcccttttcatggtc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
ASB for transcription factors
IKZF2_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.44 2.00 1.006.8·10-3 1.00 n/a n/a
ANDR_HUMAN 2.31 -1.25 7.1·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland Artery_Aorta Artery_Tibial Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Testis

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