rs6664344 chr1:34530436 A>C
- Sequence
aatgggatgtcaagtttccacccc[A/C]ctgccctctctacttcttatttta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN EP300_HUMAN SRF_HUMAN RELB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.93 | -2.22 | 1.25 | n/a | No Hit | |||
| EP300_HUMAN | 2.54 | -1.01 | 1.00 | n/a | n/a | |||
| SRF_HUMAN | 2.09 | -1.83 | 1.00 | n/a | No Hit | |||
| RELB_HUMAN | 2.76 | -2.50 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 1.83 | -3.31 | 1.50 | n/a | No Hit |
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