rs6671723 chr1:11908021 C>G
- Sequence
ccttcaacatatctttctcggaac[C/G]gagattgctgtcccagaattgtct
- ASB in cell types
- K562 (myelogenous leukemia) Peyer's patch ID00014 (lymphoblastoid cell, DiGeorge syndrome) transverse colon
- ASB for transcription factors
- CTCF_HUMAN ZN316_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.31 | 1.59 | 1.32 | n/a | No Hit | |||
| ZN316_HUMAN | -0.55 | 1.13 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | 1.93 | -0.42 | 1.33 | n/a | No Hit |
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