rs6675476 chr1:224067721 T>G

Sequence
tactttaatagtaccctgtcaaac[T/G]agatgactcagtggcctcatcaca
ASB for transcription factors
FOXA2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 1.67 -0.51 0.021.00 1.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  ldl cholesterol,  rheumatoid arthritis,  total cholesterol
GTEx eQTL Heart_Atrial_Appendage,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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