rs6681720 chr1:173415283 C>T

Sequence
tatctccccaacacatagttgtgc[C/T]tcagctggtgcactgtcaagaggc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN n/a 2.59 1.008.6·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol microalbuminuria premature ovarian failure serum creatinine total cholesterol
GTEx eQTL Lung Thyroid Whole_Blood

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