rs6686248 chr1:37726624 A>G
- Sequence
cctttctctgctcaccctcctgca[A/G]gcttctttctgctgggggtgggag
- ASB in cell types
- neural cell
- ASB for transcription factors
- SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -2.11 | 2.60 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, ldl cholesterol change with statins, microalbuminuria, total cholesterol change with statins, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Coronary, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid